Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSEKAVQLTEFVGTAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATNTEVVKIELPRDTKGGAGH------GSLIIFGGD-DVSDVKRAVEVALNELDKTFGDVYGNEAG--HIEL--QYTARASHALEKAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPADGTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI |
3GFH Chain:A ((11-211)) | -----------------VTAMRVIASVNADFARELKLPPHIRSLGLISADSDD-VTYIAADEATKQAMVEVVYGRS---LYAGAAHGPSPTAGEVLIMLGGPNPAEVRAGLDAMIAHIENGA--AFQWANDAQDTAFLAHVVSRTGSYLSSTAGITLGDPMAYLVAPPLE-ATYGIDAALKSADVQLATYVP---PPSETNYSAAFLTGSQAACKAACNAFTDAVLEI---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98226 for 1585 contacts (-62.0/contact) +
2D Compatibility (PS) -20312 + (NN) -7652 + (LL) 1288
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -135152.0 ( -85.27 by residue)
QMean score : 0.463
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