Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LQDLTLFLEQYKKVIDESLFKEINERNIEPRLKESMLYSIQAGGKRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKWTNHKVFGDATAILAGDALLTLAFSILAEDD-NLSFETRIALINQISFSSGAEGMVGGQLADLEAENKQ--VTLEELSSIHARKTGELLIYAVTSAAKIAEADPEQTKRLRIFAENIGIGFQISDDILDVIGDETKMGKKTGADAFLNKSTYPGLLTLDGAK-RALNEHVTIAKSALSGHDFDDEILLKLADLIALREN |
4LLS Chain:B ((53-280)) | ---------------------------------EAMAHAT-SGGKRLRGFLVLETARLHDIAAGEAIWSATAIEALHAYSLVHDDLPCMDNDDMRRGQPTVHKKWDDATAVLAGDALQTLAFELVTHPGASASAEVRADLALSLARASGAQGMVLGQALDIAAETARAPLSLDEITRLQQGKTGALIGWSAQAGARLAQADTAALKR---YAQALGLAFQIADDILDVTGDSAQVGKAVGKDASAGKATFVSLLGLDAARARAMS-------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4LLS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41707 for 1820 contacts (-22.9/contact) +
2D Compatibility (PS) -24176 + (NN) -11154 + (LL) 6240
1D Compatibility (HY) -11600 + (ID) 5100
Total energy: -87497.0 ( -48.08 by residue)
QMean score : 0.392
|
|
|