Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKFLLFDL-TNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK |
4CIS Chain:B ((2-271)) | -PELPEVETVRRELEKRIVGQKIISIEATYPRMVL-TGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSD-GQLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSIR-----LGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79056 for 2141 contacts (-36.9/contact) +
2D Compatibility (PS) -28081 + (NN) -4665 + (LL) 452
1D Compatibility (HY) -21600 + (ID) 5800
Total energy: -138750.0 ( -64.81 by residue)
QMean score : 0.468
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