Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVHMLVGQEIEGVRRRGKFLLFDL-TNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
4CIS Chain:B ((2-271))-PELPEVETVRRELEKRIVGQKIISIEATYPRMVL-TGFEQLKKELTGKIIQGIIRRGKYLIFEIGDDFRLISHLRMEGKYRLATLDAPREKHDHLTMKFSD-GQLIYADVRKFGTWELISTDQVLPYFLNKKIGPEPTYEDFDEKLFREKLRKSTKKIKPYLLEQTLVAGLGNIYVDEVLWLAKIHPEKEANQLIESSIHLLHDSIIEILQKAIKLGGSSIR-----LGSTGKMQNELQVYGKTGEKCSRCGAEIQKIKVAGRGTHFCPFCQQ


General information:
TITO was launched using:
RESULT:

Template: 4CIS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -79056 for 2141 contacts (-36.9/contact) +
2D Compatibility (PS) -28081 + (NN) -4665 + (LL) 452
1D Compatibility (HY) -21600 + (ID) 5800
Total energy: -138750.0 ( -64.81 by residue)
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_4CIS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CIS-query.scw
PDB file : Tito_Scwrl_4CIS.pdb: