Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEILLQKVYDQENLSKEEMNIIATEIFEGRLSKTKMAAFLMALKVKGETAEEMAGIAQAMQQVAIQVAFPAGT----AMDNCGTGGDKSNSFNISTTSAFVLAAAGIPVAKHGNRSISSRSGSADVCQELGIDINLRPEDMTYLLEKVGIAFLFAPHVHPNMKYVMDVRKELGTPTIFNLIGPLTNPVHLETQLMGIYRRDLLEQTAEVLGQLGRKRAVVLNGAGFMDEASLAGENHYALYENGEVHLYTLRPEDVGLTSYPLEAITGGDAKENAAILRSVLEGEPGAYLDTVLLNAGFGLFANGKVET-------VQEGVDLAKDLISSGLAKQKLADLITYQKEVLAK |
| 4OWV Chain:B ((30-370)) | ---ILGRLTDNRDLARGQAAWAMDQIMTGNARPAQIAAFAVAMTMKAPTADEVGELAGVMLSHAHP--LPADTVPDDAVDVVGTG--GVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLVARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAAR-RSSVLVVHGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAIVAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQI--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OWV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193273 for 3001 contacts (-64.4/contact) +
2D Compatibility (PS) -35106 + (NN) -13941 + (LL) 816
1D Compatibility (HY) -21200 + (ID) 6100
Total energy: -268804.0 ( -89.57 by residue)
QMean score : 0.555
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