Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSFNWQTEKVYEEIKYE-SYEGIAKITINRPEVHNAFTPKTVTEMIDAFNLARDNSNLGVIILTGEGEKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLIRVIPKPVIAMVAGWSIGGGNVLQLVCDLTIAADNAKFGQTGPNVGSFDAGYGSGYLARVIGHKKAKEVWFMCRQYTADEALEMGWINTVVPVADLEKETVAWAKEMLQKSPTALRFIKAAFNADTDGLAGIQQLAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP
4ELX Chain:E ((22-285))
----------FEDIRYEKSTDGIAKITINRPQVRNAFRPLTVKEMIQALADARYDDNIGVIILTGAGDKAFCSGGD--------------VHHLNVLDFQRQIRTCPKPVVAMVAGYSIGGGHVLHMMCDLTIAADNAIFGQTGPKVGSFDGGWGASYMARIVGQKKAREIWFLCRQYDAKQALDMGLVNTVVPLADLEKETVRWCREMLQNSPMALRCLKAALNADCDGQAGLQELAGNATMLFYMTEEGQEGRNAFNQKRQPDFSKFKRNP
General information:
TITO was launched using:
RESULT:
Template:
4ELX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -104268 for 1939 contacts (-53.8/contact) +
2D Compatibility (PS) -27291 + (NN) -14220 + (LL) 1004
1D Compatibility (HY) -28800 + (ID) 8350
Total energy: -181925.0 ( -93.82 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_4ELX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELX-query.scw
PDB file :
Tito_Scwrl_4ELX.pdb
: