Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSGHQFKRFTMIIIVLIIAIAAAVFFFWQVDAEEQAPKVSKTELIESNKVWINNQMQIPIQDKIILSIPATNTNTTIASNGDLILETTNEEILKELASSDNRYKDIKAYRLRIEAKKVSEYITNTKYRYPTTTIQKKFANYEITSGERSVQTEKTPVQIEETTNNDIKVSLNTSYSSD---DAEVAADIFNSQIPEETTITDNTKNLITNKNVTIYPKTFVYDFTLQKNTMLVFKEQEEAVIKEPIGIEYIIK |
| 3LDW Chain:B ((186-253)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------DATLKTIIGQHLDTNIFSDKYS--HREIDVNNINVPEQPVIDINMINFGVYKNIVIH-KTAYYSFFL--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LDW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 11140 for 312 contacts (35.7/contact) +
2D Compatibility (PS) -6131 + (NN) 561 + (LL) 16380
1D Compatibility (HY) -2800 + (ID) 1050
Total energy: 18100.0 ( 58.01 by residue)
QMean score : -0.138
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