Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKKIVLLLALITVVLTVGACSDNKKETEEKANKTEEESATFLTTISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPILKKELKKRQPDQKMAYYNTDKASEKSRDNMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE
2L6C Chain:A ((1-104))
--------------------------------------MSAIRDITTEAGMAHFEGLSDAIVFFHKNLCPHCKNMEKVLD-KFGARAPQVAISSVDSEARPELMKE--------LGFERVPTLVFIRDGKVAKVFSGIMNPRELQALYASI------
General information:
TITO was launched using:
RESULT:
Template:
2L6C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21198 for 734 contacts (-28.9/contact) +
2D Compatibility (PS) -11121 + (NN) -4455 + (LL) 4736
1D Compatibility (HY) -10000 + (ID) 1000
Total energy: -43038.0 ( -58.63 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2L6C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L6C-query.scw
PDB file :
Tito_Scwrl_2L6C.pdb
: