Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALRKEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEVHESVNSTQIIAHQQIETSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLAITEAIENITKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEFPEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPFGEKLTASTTKGKIHGQVKGISDEG--VLLLQDTLGEVHSIYSADILLDNEK |
| 3EFR Chain:B ((26-225)) | -----------------------------------------------------------------------------------------------------------GTALVADRQTKGRGGLGRKWLSQEG-GLYFSFLLNPK-EFENLLQLPLVLGLSVSEALEEITEIPFSLKWPNDVYFQEKKVSGVLRELSKDK-----LIVGIGINVNQREIPEEIKDRATTLYEITGKDWDRKEVLLKVLKRISENLKKFKEKSFKEFKGKIESKMLYLGEEVKL-LGEGKITGKLVGLSEKGGALILTEEGIKEILS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108235 for 1517 contacts (-71.3/contact) +
2D Compatibility (PS) -21561 + (NN) -10674 + (LL) 10040
1D Compatibility (HY) -19600 + (ID) 3800
Total energy: -153830.0 ( -101.40 by residue)
QMean score : 0.432
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