Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIKERVIIVGSGISGCTAALRLMQ-DYDVTIITKGYKEESNSMLAQGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTHGPMVIQKLIAEGMAFDEQDGELALGLEGAHQLPRILHTGGDQTGKFLTTFL------------QEKLTDIHWQEQKMAIEIIKQNDSAIGVHCLDKENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDMEFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAIMTDVHPRADLAPRDIVAATLFAEIQDGNEVFLDITAIPNFEKRFPGITANLDAHHIPFRETKRIPVHPGAHFLMGGIRTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYIRTQKINPIDHPEIPLSNQIQTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRKTAEISHMLITAKLIAESALKRTESLGAHRILKGVIK |
2E5V Chain:B ((2-450)) | -----IYIIGSGIAGLSAGVALRRAGKKVTLISKRI-DGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTSEAKNVIETFESWGFEFEED-----LRLEGGHTKRRVLHRT-DETGREIFNFLLKLAREEGIPIIEDRLVEIRVKDGKVTGFVTEKRGL---VEDVDK-----------LVLATGGYSYLYEYSSTQSTNIGDGMAIAFKAGTILADMEFVQFHPTVTSLDGEVF-LLTETLRGEGAQIINENGERFLFNYDKRGELAPRDILSRAIYIEMLKGHKVFIDLSKIEDFERKFPVVAKYLARHGHNYK--VKIPIFPAAHFVDGGIRVNIRGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSSWEGISTDDGIVHSVRISGNKTLSLKEIRRINWENVGIIRNEEKLVKAIN-----TYSSSTQNEAIISY------LTALAAEIRKESRGNH-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2E5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -212920 for 4004 contacts (-53.2/contact) +
2D Compatibility (PS) -45976 + (NN) -6414 + (LL) 3584
1D Compatibility (HY) -32800 + (ID) 8350
Total energy: -302876.0 ( -75.64 by residue)
QMean score : 0.467
|
|
|