Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNEKGHLFAFDQDQTAIDNAKIKLADYSDKVTFIKANFRDMKEALNERG-IEAVDGILYDLGVSSPQLDERERGFSYHQDAALDMRMDQEQELTAKTVVNEWSYQDLIRIFFQYGEEKFSKQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELGAVEDSLEKALTLIKPGGRISVITFHSLEDRITKQLFQEATKGPDLPPGLPVIPDEYKPDFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK |
3TKA Chain:A ((42-346)) | ----TTVLLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDD---PRFSIIHGPFSALGEYVAERDLIGKIDGILLDLGVSSPQLDDAERGFSFMRDGPLDMRMDPTRGQSAAEWLQTAEEADIAWVLKTYGEERFAKRIARAIVERNREQPMTRTKELAEVVAAATPVK------HPATRTFQAVRIWVNSELEEIEQALKSSLNVLAPGGRLSIISFHSLEDRIVKRFMRENSRG-----------------RQLRALGKLMPGEEEVAENPRARSSVLRIAERTN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -83134 for 2391 contacts (-34.8/contact) +
2D Compatibility (PS) -30271 + (NN) -9488 + (LL) 332
1D Compatibility (HY) -23600 + (ID) 6350
Total energy: -152511.0 ( -63.79 by residue)
QMean score : 0.536
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