Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTKKRGLMLLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGKPVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKNVPDKIKYLAEK
2HEQ Chain:A ((1-84))
MAGDPLPKYWSYPVGLAVEI-------NNNARYGCPHHVGRKGKIIEHLHSATYDYA--VSDETGD---ITYFKEHELTP------LKGGLAYVLEHHHHHH-----------
General information:
TITO was launched using:
RESULT:
Template:
2HEQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -410 for 478 contacts (-0.9/contact) +
2D Compatibility (PS) -8512 + (NN) 4546 + (LL) 2384
1D Compatibility (HY) -2400 + (ID) 1000
Total energy: -5392.0 ( -11.28 by residue)
QMean score : 0.126
(partial model without unconserved sides chains):
PDB file :
Tito_2HEQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HEQ-query.scw
PDB file :
Tito_Scwrl_2HEQ.pdb
: