Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVTHS--KNGY-YDGLIFHRVIPEFMIQGGD-PDGRGTGGESIWGESFEDE-FSTEAFNLRGALSMANAGPNTNGSQFFI-VQKPDMPADMLGQMEQAGFPVEVIEAYKQGGTPWLDGRHTVFGHVIEGMDVVDEIANLPTGMQDKPVNDVVI---EKINIK
2ESL Chain:C ((30-180))
-----------------------GRIVIGLFGKVVPKTVENFVALATGEKGYGYKGSKFHRVIKDFMIQGGDITTGDGTGGVSIYGETFPDENFKLKHYGI-GWVSMANAGPDTNGSQFFITLTKP----------------------------TWLDGKHVVFGKVIDGMTVVHSIELQATDGHDRPLTNCSIINSGKIDVK
General information:
TITO was launched using:
RESULT:
Template:
2ESL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52382 for 1015 contacts (-51.6/contact) +
2D Compatibility (PS) -15052 + (NN) -7225 + (LL) 3720
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -90239.0 ( -88.91 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2ESL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ESL-query.scw
PDB file :
Tito_Scwrl_2ESL.pdb
: