Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETT--WLHEAAAGTIEPEKLMYPLDKVVNDTKTTFIQD-TVVKINKDEKTVTLDANGDISYDYLLIALGSEAETFGISGLK-EYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLPQF-DAKLVDYGVGVLEDRGVEFHVGKPVKEATADG-----VKYAESENEVREIKAATIIWAAGVRGNSVIE-ASGFEAGRGRVKVNNNLTVPGNEEILIVGDCSLIINPA-NDR-PFPPTAQIAMQQADVAAVNLAKLVKGETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK
3LXD Chain:A ((8-321))-ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLAREKTFERICIRPAQFWEDKAVEMKLGAEVVSLDPAAHTVKLGDGSAIEYGKLIWATGGDPRRLSCVGADLAGVHAVRTKEDADRLMAELDA-----------GAKNAVVIGGGYIGLEAAAVLTKF-------------GVNVTLLEALPRVLARVAGEALSEFYQAEHRAHGVDLRTGAAMDCIE-GDGTKVTGVRMQD--G-SVIPADIVIVGIGIVPCVGALISAGAS-GGNGVDVDEFCRT-SLTDVYAIGDCAAHANDFADGAVIRLESVQNANDMATAAAKDICGA-----------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3LXD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -194784 for 2518 contacts (-77.4/contact) +
2D Compatibility (PS) -32060 + (NN) -7354 + (LL) 5756
1D Compatibility (HY) -8000 + (ID) 3100
Total energy: -239542.0 ( -95.13 by residue)
QMean score : 0.588

(partial model without unconserved sides chains):
PDB file : Tito_3LXD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LXD-query.scw
PDB file : Tito_Scwrl_3LXD.pdb: