Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MRVIDTHCDALYKLQAG------KGKYTFQDAEELDVNFERLIEAKMLLQGFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPED-KIGAMLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGA------GLTRFGKDIIHLLNERKVFTDVSHLSVKAFWETLEQAEF-VIASHSSAKAICAHPRNLDDEQIKAMIEHDAMIHVIFHPLFTTNDGVADIEDVIRHIDHICELGGMKNIGFGSDFDGIPDHVKGLEHAGKYQNFLETLGKH-YTKEEVEGFASRNFLNHLPK---------------------------------
1ITU Chain:A ((1-369))DFFRDEAERIMRDSPVIDGHNDLPWQLLDMFNNRLQDERANLTTLAGTHTNIPKLRAGFVGGQFWSVYTPCDTQNKDAVRRTLEQMDVVHRMCRMYPETFLYVTSSAGIRQAFREGKVASLIGVEGGHSIDSSLGVLRALYQLGMRYLTLTHSCNTPWADNWLVDTGDSEPQSQGLSPFGQRVVKELNRLGVLIDLAHVSVATMKATLQLSRAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAELLRRNWTEAEVKGALADNLLRVFEAVEQASNLTQAPEEEPIPLDQLGGSCRTHYGYSS


General information:
TITO was launched using:
RESULT:

Template: 1ITU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191399 for 2911 contacts (-65.8/contact) +
2D Compatibility (PS) -33205 + (NN) -14098 + (LL) 0
1D Compatibility (HY) -17600 + (ID) 4100
Total energy: -260402.0 ( -89.45 by residue)
QMean score : 0.488

(partial model without unconserved sides chains):
PDB file : Tito_1ITU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1ITU-query.scw
PDB file : Tito_Scwrl_1ITU.pdb: