Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MLKYN-IRGENIEVTEPIRDYVEKK-IDKLERYFTETP---------------DANVHVNLKVYSDKNAKVEVTIPLPNLVLRAEETS-GDLY-ASID-------LIVDKLERQIRKHKTKVNRKFRDKGAER--DYFAYSDV-NGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFYVYTDAETNGTNIVYSRKDGKYGLIETN |
| 1VKW Chain:A ((2-218)) | GSDKIHHHHHHMNIFEAIENRHSVRDFLERKMPERVKDDIENLLVKFITKKLDWKINLSSFPSYIYAKAEKHFDELVEYGFQGEQIVLFLTAQGFGTCWMARSPHPDVPYIIVFGYPRTRNFTRKRRPITSFLENDLEELPPEIVKIVEMTILAPSALNRQPWKIKY-TGGELCISSER----PVDLGIALSHAYLTAREIFKREPVIQKRGEDTYCLILNP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VKW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14456 for 1278 contacts (11.3/contact) +
2D Compatibility (PS) -19019 + (NN) -1740 + (LL) 516
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -10987.0 ( -8.60 by residue)
QMean score : 0.121
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