Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEFFNGHFPEYPVMPGVLIVEALAQTSGIAMMQS-EANKGKIGLFAGIDGCRFKRQVVPGDQLLLEAEITRMRGAIAKAKVKAT--VEGDLVCE-AEIMFALSDLPK
3AZB Chain:C ((11-152))
-IDIEDIKKILPHRYPFLLVDKVIYMQPNKTIIGLKQVSTNEPFFNGHFPQKQIMPGVLQIEALAQLAGILCLKSDDSQKNNLFLFAGVDGVRWKKPVLPGDTLTMQANLISFKSSLGIAKLSGVGYVNGKVVINISEMTFAL-----
General information:
TITO was launched using:
RESULT:
Template:
3AZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87997 for 988 contacts (-89.1/contact) +
2D Compatibility (PS) -14500 + (NN) 430 + (LL) 204
1D Compatibility (HY) -18000 + (ID) 3350
Total energy: -123213.0 ( -124.71 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3AZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3AZB-query.scw
PDB file :
Tito_Scwrl_3AZB.pdb
: