Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL
2A1J Chain:A ((4-38))
-DFLLKMPGVNAKNCRSLMH-HVKNIAELAALSQDEL----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2A1J.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7353 for 151 contacts (-48.7/contact) +
2D Compatibility (PS) -3760 + (NN) -1641 + (LL) 4008
1D Compatibility (HY) -2400 + (ID) 400
Total energy: -11546.0 ( -76.46 by residue)
QMean score : 0.796
(partial model without unconserved sides chains):
PDB file :
Tito_2A1J.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A1J-query.scw
PDB file :
Tito_Scwrl_2A1J.pdb
: