Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAVGIRA-NT--AKD----IRAIQSEIDVPIIGIYKKDYDDSDVFI-TP-TLKEVREICETGVEIVAMDATTRKRPHNEDLKDILSAIRKEFPNTLFMADTASIEDVYYADSLGFDLIGTTLYGYTEETANKNISDDDFSHL-KEVLKSTK-RPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQE--ITTRFTNEIQKIQEERGK
2Z6I Chain:A ((3-214))
--TRITELLKIDYPI-----FQGGMAWV-ADGDLAGAVSKAGGLGIIGGGNAPKEVVKANIDKIKSLTDKPFGV---------NIMLLSPFVEDIVDLVIEEGVKVVTTGAGN---PS-----KYMERFHEA--GIIVIPVVPSVALAKRMEKIGADAV--IAEGMEAG--GHIGKLTTMTLVRQ--VATAISIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVAKESNAHPNYKEKIL--------
General information:
TITO was launched using:
RESULT:
Template:
2Z6I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101231 for 1695 contacts (-59.7/contact) +
2D Compatibility (PS) -21222 + (NN) -10319 + (LL) 2284
1D Compatibility (HY) -7600 + (ID) 1950
Total energy: -140038.0 ( -82.62 by residue)
QMean score : 0.485
(partial model without unconserved sides chains):
PDB file :
Tito_2Z6I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Z6I-query.scw
PDB file :
Tito_Scwrl_2Z6I.pdb
: