Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------------MSKPNVVQLNNQYINDENLKKRYEAE--ELRR----------KNRLMGWVLIFVMLLFILPTYNLVKSYRT-LQERRQEVVKLTKDYQTLTNRT-E--NQKLLAKQL------KNPDYVQKYARAKYYFSKTGEMIY---PLPDLLPK-------------------------------------------------------------------------------------------- |
4L4W Chain:A ((1-267)) | GHMGPNAVELTTDQAWCLADVLGAGSYPWVLAITPPYSDHSQRSAFLAAQSAELTRMGVVNSAGAVDPRVAQWITTVCRATQWLDLRFVL--LRGMVARRSEETVVALRNAQLVTFTAMDIGHQHALVPVLTAGLSGRKPARFDDFALPAAAGARADEQIRNGAPLAEVLEFLGVPPSARPLVESVFDGRRTYVEIVAGEHRDGHRVTTEVGVSIIDTPHGRILVHPTKAFDGEWISTFTPGSADAIAMAVERLTASLPSGSWF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L4W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10536 for 607 contacts (-17.4/contact) +
2D Compatibility (PS) -12468 + (NN) 1184 + (LL) 36
1D Compatibility (HY) -2400 + (ID) 1350
Total energy: -25534.0 ( -42.07 by residue)
QMean score : 0.190
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