Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMNKKVLLTSTMAASLLSVASVQAQETDTTWTARTVSEVKADLVKQDNKSSYTVKYGDTLSVISEAMSIDMNVLAKINNIADINLIYPETTLTVTYDQKSHTATSMKIETPATNAAGQTTATVDLKTNQVSVADQKVSLNTISEGMTPEAATTIVSPMKTYSSAPALKSKEVLAQEQAVSQAAANEQVSPAPVKSITSEVPAAKEEVKPTQTSVSQSTTVSPASVAAE---TPAPVAKVAPVRTVAAPRVAS---VKVVTPK-----VETGASPEHVSAPAVPVTTTSPATDSKLQATEVKSVPVAQKAPTATPVAQPASTTNAVAAHPENAGLQPHVAAYKEKVASTYGVNEFSTYRAGDPGDHGKGLAVDFIVGTNQALGNKVAQYSTQNMAANNISYVIWQ-QKFYSNTNSIYGPANTWNAMPDRGGVTANHYDHVHVSFNK |
| 1Q9J Chain:A ((1-418)) | -MFPGSVIRKLSHSEEVFAQYEV-----FTSMTIQLRGVIDVDALSDAFDALLET-HPVLASHLEQSSDGGWNLVADDLLHSGICVIDAELRL-------DQSVSLLHLQLILREGGAELTLYLH-----HCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKAE--------RFMSVMYAYPGLPQAVPVTRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQLRNTPHVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGPNTDIVDLASDIVATLRADLANGVIQQSGLHFGTAFEGTPPGLPPLVFCTDA--------TSFPTMR--TP----PGLEIEDIKGQF---------YCSISVPLDLYSCAVYAGQLIIEHHGHIAEPGKSLEAIRSLLCTVPSEYG-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1Q9J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 54657 for 3050 contacts (17.9/contact) +
2D Compatibility (PS) -38882 + (NN) 4548 + (LL) 3496
1D Compatibility (HY) -8400 + (ID) 2900
Total energy: 12519.0 ( 4.10 by residue)
QMean score : 0.137
|
|
|