Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------MISKPDKNKIRQKRHRRVRGKLSGTADRPRLNIFRSNTGIYAQVIDDVA--GVTLASASTLDKEV----SNGTKTEQAVVVGKLVAERAVAKGISEVVFDRG--GYLYHGRVKALADSARENGLKF--------------------------------------------------------- |
1JJ2 Chain:M ((1-186)) | ATGPRYKVPMRRRREARTDYHQRLRLLKSG---KPRLVARKSNKHVRAQLVTLGPNGDDTLASAHSSDLAEYGWEAPTGNMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGLDIPHNDDVLADWQRTRGAHIAEYDEQLEEPLYSGDFDAADLPEHFDELRETLLDGDIEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5466 for 858 contacts (-6.4/contact) +
2D Compatibility (PS) -12536 + (NN) -5717 + (LL) 120
1D Compatibility (HY) 0 + (ID) 1700
Total energy: -25299.0 ( -29.49 by residue)
QMean score : 0.428
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