Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKS-ELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGV----EEVEVDSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN------ |
| 1DDT Chain:? ((200-380)) | ---------SCINLDWDVIRDKTKTKIESLKEHGPIKNKMSESPNKTVSEEKAKQYLEEFHQTALE-HPELSELKTVTGTN----PVFAGANYAAWAVNVAQVIDSETA-DNLEKTTAALSILPGIGSVMGIADGAVHHNTEEIVAQSIALSSLMVAQAIPLVGELVDIGFAA-----YNFVESIINLFQVVHNSYNRPAY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DDT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 27541 for 1357 contacts (20.3/contact) +
2D Compatibility (PS) -18262 + (NN) -10156 + (LL) 2220
1D Compatibility (HY) -4400 + (ID) 1400
Total energy: -4457.0 ( -3.28 by residue)
QMean score : 0.385
|
|
|