Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTRYKAQI------------SYDGSAFSGF-QRQPNCRTVQEEIERTLKRLNSGNDVIIHGAGRTDAGVHAYGQVIHFDLPQARDVEKLRFGLDTQCPDDIDIVKVEQVSDDFHCRYDKHI-----KTYEFLVDIGRPKNPMMRNYATHYPYPVIIELMQEAIKDLVGTHDFTGFTASG----TSVENKVRTIFDAKIQFEAS--KNLLIFTFTGNGFLYKQVRNMVGTLLKIG-NGRMPISQIKTILQAKNR--DLAGPTAA-------GNGLYLKEIIYEDKECFSNFRK |
| 4RHJ Chain:A ((19-318)) | SHMFSKFLMNVKGVTPRGSDWANRLGPVALFGYGAGMPRRAPLLDFFLQSPRDCDHYAELTIHDKGPIECPPETVMFMPVLNCGQMLDEAA---GTETPTSDEWYLGSLEASTELLEKGYVPVSVGGDGSATLSMVEAYKRLFPSDDIVIVHFSARPSVSDPRSPLRVLLDKGLLKGVVSVGNRQVSSEDRKVRKLHKMFYMDMRDIRNDYPVFISIDASVLDPAFAPAVDSPVAGGLSTRDLLHIMNGIRGPKVVGIDVYGYNPDLDVYRKDNVGLTAIALSKIIKEGILK--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -10178 for 2003 contacts (-5.1/contact) +
2D Compatibility (PS) -26248 + (NN) -2869 + (LL) 704
1D Compatibility (HY) -4000 + (ID) 1800
Total energy: -44391.0 ( -22.16 by residue)
QMean score : 0.102
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