Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----MILDYNKLKQETKAIVVDIIERSALKKGQIFVLGLSSSEVSGGLIGKNSSSEIGEIIVEVILKELHSRGIYLAVQGCEHVNRALVVEAE------LAERQQLEVVNVVPNLHAGG--SGQVAAFKLMTSPVEVEEIVAHAGIDIGDTSIGMHIKRVQVPLIPISRELGGAHVTALASRP-KLIGGARAGYTSDPIRKF----------- |
| 3VE9 Chain:A ((1-204)) | MNRVILSLDSPIPEETLRKLNGKV---AGIKVGWPLLLNLGKEKVKELVGLVD-----GIKILDLKLADI-DNTMILIVDELKDITNSFIAHAFVGVEGSLASLSQRVDLFLVLSMSHPGWNDAFYPYLREVARRVNPKGFVAPATRPSMISRVKGDFPDKLV-ISPGVGTQGAKPGIALCHGADYEIVGRSVYQSADPVRKLEEIVRSQEEVL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3VE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -55392 for 1422 contacts (-39.0/contact) +
2D Compatibility (PS) -18451 + (NN) 3470 + (LL) 536
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -79087.0 ( -55.62 by residue)
QMean score : 0.098
|
|
|