Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHG-HYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAM-VETGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA |
1GVF Chain:A ((2-284)) | -SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIA-LEEIYALCSAY--STTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG--------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYS-KTPKIDFQRLAEIREV-VDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAE---------NPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126777 for 2344 contacts (-54.1/contact) +
2D Compatibility (PS) -30676 + (NN) -19644 + (LL) 1448
1D Compatibility (HY) -20400 + (ID) 5150
Total energy: -201199.0 ( -85.84 by residue)
QMean score : 0.637
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