Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIVSAEKFVQAARDNGYAVGGFNTNNLEWTQAILRAAEAKKAPVLIQTSMGAAKYMGGYKLCKQLIETLVESMGITVPVAIHLDHG-HYDDALECIEVGYTSIMFDGSHLPVEENLEKAREVVAKAHAKGISVEAEVGTIGGEEDGIVGKGELAPIEDAKAM-VETGIDFLAAGIGNIHGPYPANWEGLDLDHLKKLTEAVPGFPIVLHGGSGIPDDQIQEAIKLGVAKVNVNTECQLAFCQATRDYAVEFNANEAEYMKKKLFDPRKFLKPGFDAITEAVEERIDVFGSANKA
1GVF Chain:A ((2-284))-SIISTKYLLQDAQANGYAVPAFNIHNAETIQAILEVCSEMRSPVILAGTPGTFKHIA-LEEIYALCSAY--STTYNMPLALHLDHHESLDDIRRKVHAGVRSAMIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLG--------SAFLTDPQEAKRFVELTGVDSLAVAIGTAHGLYS-KTPKIDFQRLAEIREV-VDVPLVLHGASDVPDEFVRRTIELGVTKVNVATELKIAFAGAVKAWFAE---------NPQGNDPRYYMRVGMDAMKEVVRNKINVCGSANRI


General information:
TITO was launched using:
RESULT:

Template: 1GVF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126777 for 2344 contacts (-54.1/contact) +
2D Compatibility (PS) -30676 + (NN) -19644 + (LL) 1448
1D Compatibility (HY) -20400 + (ID) 5150
Total energy: -201199.0 ( -85.84 by residue)
QMean score : 0.637

(partial model without unconserved sides chains):
PDB file : Tito_1GVF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GVF-query.scw
PDB file : Tito_Scwrl_1GVF.pdb: