Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEINEKVEPQPIDLGEYKFGFHDDVKPIYSTGKGLNEAVIRELSAAKGEPEWMLDFRLKSLETFNKMPMQTWGADLSDIDFDDIIYYQKASDKPARDWDDVPEKIKETFERIGIPEAE--RAYLAGASAQYESEVVYHNMKE-EYDKLGIVFTDTDSALKEYPELFKKYFAKLVPPTDNKLAALNSAVWSGGTFIYVPKGVKVDIPLQTYFRINNENTGQFERTLIIVDEGASVHYVEGCTAPTYSSNSLHAAIVEIFALDGAYMRYTTIQ--NWSDNVYNLVTKRATAKKDATVEWIDGNLGAKTTMKYPSVYLDGEGACGTMLSIAFANKGQHQDTGAKMIHNAPHTSSSIVSKSIAKGGGKVDYRGQVTFNKDSKKSVSHIECDTILMDDISKSDTIPFNEIHNSQVALEHEAKVSKISEEQLYYLMSRGLSEAEATEMIVMGFVEPFTKELPMEYAVELNRLISYEMEGSVG |
| 3DU1 Chain:X ((0-236)) | ----------------------------------HMNVGEILRHYAAGKR-----NFQHINLQEIELTNASLTGADLSYADLRQTRLGKSNFSHTCLREADLSEAI---LWGIDLSEADLYRAILREADLT-GAKLVKTRLEEANLIKASLCGANLNSANLSRCLLFQADL----RPSSNQRTDLGYVLLTGADLSYA------DLRAASLHHANLDGA-----KLCRANFGRTIQW--GNLAADLSGASLQGADLSYANLESAILRKANLQGADLTGAILKDAELKGAIMPDGSIH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DU1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 61903 for 2117 contacts (29.2/contact) +
2D Compatibility (PS) -22966 + (NN) -1347 + (LL) 14924
1D Compatibility (HY) 13600 + (ID) 750
Total energy: 65364.0 ( 30.88 by residue)
QMean score : ?
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