Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDYKKYQIIYAPDVLEKLKEIRDYISQNYSSTSGQRKMEQIINDIEKLEVFPEVGFDADEKYGSEISNYHSTRGYTLSKDYIVLYHIEEEENRVVIDYLLPTRSDYMKLFK
3G5O Chain:B ((16-96))
---VPYTVRFTTTARRDLHKL---------PPRILAAVVEFAF--GDLSREPL-------RVGKPLRRELAGTFSARRGTYRLLYRIDDEHTTVVILRVDHR---------
General information:
TITO was launched using:
RESULT:
Template:
3G5O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38416 for 558 contacts (-68.8/contact) +
2D Compatibility (PS) -8782 + (NN) -3151 + (LL) 1728
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -52071.0 ( -93.32 by residue)
QMean score : 0.645
(partial model without unconserved sides chains):
PDB file :
Tito_3G5O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3G5O-query.scw
PDB file :
Tito_Scwrl_3G5O.pdb
: