Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKEVVVESFELDHTIVKAPYVRLISEEVGPVGDIITNFDIRLIQPNENAIDTAGLHTIEHLLAKLIRQRI-NGLIDCSPFGCRTGFHMIMWGKQ-DATEIAKVIKSSLEAIAGGVTWEDVPGTTIESCGNYKDHSLHSAQEWAKLILSQGISDNAFERHIV
1TKE Chain:A ((68-129))
---------------------------------------------------LEIIRHSCAHLLGHAIKQLWPHTKMAIGPVI-DNGFYYDVDLDRTLTQEDVEALEKRMHELAEKNYDVIKKKVSWHEARETFANRGESYKVSILDENIAHDDKPGLYFHEE
General information:
TITO was launched using:
RESULT:
Template:
1TKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28311 for 345 contacts (-82.1/contact) +
2D Compatibility (PS) -6462 + (NN) -3564 + (LL) 4192
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -37495.0 ( -108.68 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_1TKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TKE-query.scw
PDB file :
Tito_Scwrl_1TKE.pdb
: