Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAYLSKLSDLDPSLMDADSEQIYIPKVLFEHNDFKGLTYKEILLYSFLLNRLREPLDFIQKGYDDNEDTYVHFKVEDLCELLNQSKTTVISLKKRLAQYGLIEEVKAGSHQPNRIYLTDKLVPYIKG
3S2W Chain:A ((46-112))
----------------------------------YGIGSGQFPFLMRLY---------------REDG----INQESLSDYLKIDKGTTARAIQKLVDEGYVFRQRDE--RSYRVFLTEKGKKLEPD
General information:
TITO was launched using:
RESULT:
Template:
3S2W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28055 for 411 contacts (-68.3/contact) +
2D Compatibility (PS) -6988 + (NN) -3780 + (LL) 3400
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -38423.0 ( -93.49 by residue)
QMean score : 0.664
(partial model without unconserved sides chains):
PDB file :
Tito_3S2W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3S2W-query.scw
PDB file :
Tito_Scwrl_3S2W.pdb
: