Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKQKIAVLGPGSWGTALAQVLNDNGHEVRLWGNVVEQIEEINTSHTNQRYFKDITLDSKIKAYTNLEEAINNVDSILFVVPTKVTRLVAKQVANLLKHKVVIMHASKGLEPGTHERLSTILEEEISEQYRSDIVVVSGPSHAEEAIVRDITLITAASKDIGAAKYVQKLFSNHYFRLYTNTDVVGVETAGALKNIIAVGAGALHGLGYGDNAKAAIITRGLAEITRLGVQLGADPLTFSGLSGVGDLIVTGTSVHSRNWRAGDALGRGEKLEDIE--KNMGMVIEGISTTKVAYEIAQNLNVYMPITEAIYKSIYEGANIKDSILDMMSNEFRSENEWH |
1Z82 Chain:A ((14-325)) | --EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRKEIVDLINVSHTSP-YVEESK--ITVRATNDLEE-IKKEDILVIAIPVQYIREHLLRLPV---KPSMVLNLSKGIEIKTGKRVSEIVEEILG--C--PYAVLSGPSHAEEVAKKLPTAVTLAGENS---KELQKRISTEYFRVYTCEDVVGVEIAGALKNVIAIAAGILDGFGGWDNAKAALETRGIYEIARFGMFFGADQKTFMGLAGIGDLMVTCNSRYSRNRRFGELIARGFNPLKLLESSNQVVEGA--FTVKAVMKIAKENKIDMPISEEVYRVVYEGKPPLQSMRDLMR---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160124 for 2844 contacts (-56.3/contact) +
2D Compatibility (PS) -32630 + (NN) -4180 + (LL) 2020
1D Compatibility (HY) -18800 + (ID) 6600
Total energy: -220314.0 ( -77.47 by residue)
QMean score : 0.513
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