Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLENIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDI----------DSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKISQKLYKKYQNKLPL-KALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQELEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL |
| 3C1D Chain:B ((8-161)) | ---------------------------------------------------GPAYARLLDRAVRILAVRDHSEQELRRKLAAPIMGKNGPEEIDATAEDYERVIAWCHEHGYLDDSRFVARFIASRSRKG-YGPARIRQELNQKGISREATEKAMREAD-IDWAALARDQATRKYGEPLPTVFSEKVKIQRFLLYRGYLMEDIQDIW-------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3C1D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29685 for 988 contacts (-30.0/contact) +
2D Compatibility (PS) -14989 + (NN) -4162 + (LL) 10364
1D Compatibility (HY) -4000 + (ID) 1450
Total energy: -43922.0 ( -44.46 by residue)
QMean score : 0.564
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