Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSYIEKIEANKVLDLKQIVPIEEEQMLSKTLVQRKDLGMTV-F-SLDKGQEIGRHSSPGDAMVNILSGLAQITIDQDKFDVAAGECIVMPANIPHSLYAKEAFQMLLVVVKPEV
3FJS Chain:A ((4-108))
-------PHLSSGEVASVLPLGKQLTQTPSAALFKEHRLEVMRMVLPAGKQVGSHSVAGPSTIQCLEGEVEIGVDGAQRRLHQGDLLYLGAGAAHDVNAITNTSLLVTVVLV--
General information:
TITO was launched using:
RESULT:
Template:
3FJS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40382 for 676 contacts (-59.7/contact) +
2D Compatibility (PS) -10860 + (NN) 1536 + (LL) 1144
1D Compatibility (HY) -3600 + (ID) 1000
Total energy: -53162.0 ( -78.64 by residue)
QMean score : 0.350
(partial model without unconserved sides chains):
PDB file :
Tito_3FJS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FJS-query.scw
PDB file :
Tito_Scwrl_3FJS.pdb
: