Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDLQKQLEELKISTQEKLKEMTGNHTKELQDLRVQVLGKKGSLTELLKGLKDLSNDLRPVVGKQVNEVRDILTKAFEEQAKVVEAAKIQAQLESESVDVTLPGR---QMTLGHRHVLTQTSEEIEDIFLGMG--------FQVVGG-FEVEKDYYNFERMNLPKDHPARDMQDTFYITEEILLRTHTSPVQARTMDQHDFSKGPLKMISPGRVFRRDTDDATHSHQFHQIEGLVV-----------------------------------GENISMGDLKGTLQLISQKMFGAERKIRLRPSYFPFTEPSVEVDVSCFKCGGKGCNVCKQTGWIEILGAG--MVHPSVLEMSGIDSEKYS-GFAFGLGQERIAMLRYGINDIRGFYQGDVRFTDQF |
| 3CMQ Chain:A ((25-307)) | -------------------------------------------------------------------------------------------DDHSNLTRKVLTRVGRNLHNQQHHPLWLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRTHMLRAHTSAHQWDLLHA-----GLDAFLVVGDVYRRDQIDSQHYPIFHQLEAVRLFSKHELFAGIKDGESLQLFEQSSRSAHKQETHTMEAVKLVEFDLKQTLTRLMAHLFGDELEIRWVDCYFPFTHPS------------FEMEINFHG--EWLEVLGCGVMEQQLVNSAGAQ---DRIGWAFGLGLERLAMILYDIPDIRLFWCEDERFLKQF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CMQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -73051 for 1753 contacts (-41.7/contact) +
2D Compatibility (PS) -24113 + (NN) -2257 + (LL) 8532
1D Compatibility (HY) -15200 + (ID) 3750
Total energy: -109839.0 ( -62.66 by residue)
QMean score : 0.267
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