Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQTFFMIKPDGVKRGFIGEVISRIERRGFSIDRLEVRHADADILKRHYAELTDRPFFPTLVDYMTSGPVIIEVISGEEVISTWRTMMGSTNPKDALPGTIRGDFAQAPSPNQATCNIVHGSDSPESATREIAIWFNN
3BBB Chain:E ((4-134))
-ERTFIAIKPDGVQRGLVGEIIKRFEQKGFRLVAMKFLRASEEHLKQHYIDLKDRPFFPGLVKYMNSGPVVAMVWEGLNVVKTGRVMLGETNPADSKPGTIRGDFCI-----QVGRNIIHGSDSVKSAEKEISLWFKP
General information:
TITO was launched using:
RESULT:
Template:
3BBB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73770 for 996 contacts (-74.1/contact) +
2D Compatibility (PS) -13844 + (NN) -3992 + (LL) -36
1D Compatibility (HY) -12800 + (ID) 3550
Total energy: -107992.0 ( -108.43 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_3BBB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3BBB-query.scw
PDB file :
Tito_Scwrl_3BBB.pdb
: