Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTVYLSLGSNIGDRETFLKQALFSIDHLQKTKVAQISAIYETAAWGNTNQEDFFNICCQVETDLAPFELLDYCQEIEKRLKRVRH-EHWGPRTIDIDILLFGNQVINQEDLVVPHPYMTKRAFVLVPLLEIAPQLSLPNGSKLEDYL-----EKLNLGEVHYLKPVE
1IM6 Chain:A ((1-156))
-TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGAVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPDGEMLRQILHTRAFDKLNKW---------
General information:
TITO was launched using:
RESULT:
Template:
1IM6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124655 for 1129 contacts (-110.4/contact) +
2D Compatibility (PS) -15944 + (NN) -5374 + (LL) 744
1D Compatibility (HY) -14400 + (ID) 3300
Total energy: -162929.0 ( -144.31 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1IM6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IM6-query.scw
PDB file :
Tito_Scwrl_1IM6.pdb
: