Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLT--DDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMP-HVPTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDI-IGVKPAEEYIFTVF--AMPVGSYFKG-GLTPTNFIVSKEYDRAAPNGT-GAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFFGITKDNQFITPLSPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDKFTEAGACGTAAVISP---IGGIQNGDDFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
| 1IYD Chain:A ((10-308)) | -----------------------------WFNGEMVRWEDAKVHVM--SHALHYGTSVFEGIRCYDSHKGPV-VFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNNL--------TSAYIRPLIF-VGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSSWNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALD--VNGYISEGAGENLFEVKDGVLFTPPFTSSALPGITRDAIIKLAKE-LGIEVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGIQVG--------EGRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -92154 for 2347 contacts (-39.3/contact) +
2D Compatibility (PS) -30785 + (NN) -10663 + (LL) 1984
1D Compatibility (HY) -18000 + (ID) 5250
Total energy: -154868.0 ( -65.99 by residue)
QMean score : 0.443
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