Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNTVTPKETAGSFINKVLGGTATAIVVALIPNAILATFLKPFLSYGLAAEFLHIVQVFQFFTPIMAGFLIGQQFKFTPMQQLAVGGAAYIGSGAWAYTEVIQKGVATGSFQLRGIGDLINMMLTAALAVLAVKWFGNKFGSLTIILLPIIIGTGVGYLGWKLLPYVSYVTTLIGQGINSFTTLQPIAMSILIAMAFSMLIVSPISTVAIGLAIGLNGMSASAASMGVASTTAVLVWATMKANKSGVPIAIALGAMKMMMPNFLKHPVMAIPMLMTATVSSLTVPLFKLVGTPASSGFGLVGAVGPIASFEAGASMLIVILSWLVIPFAVGFVSHKICKDILKLYKDDIFVFEGQN |
4MY8 Chain:D ((167-242)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCAT-EARKHGIPV-IADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMEKGSKLVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4MY8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85618 for 542 contacts (-158.0/contact) +
2D Compatibility (PS) -8016 + (NN) -1035 + (LL) 14312
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -83657.0 ( -154.35 by residue)
QMean score : 0.192
|
|
|