Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKEDIKKQVRRAFDFRMAIRVYNNNDIPKEDMEYILDTAWLSPSSVGLEGWRFLVLDRQTIAKFRDKLKEVAWG------------------------AQYQLDTASHFVLLLAEKGAYYNADSMINSLVRRGLGDPAALESRIPLYKSFQENDMKIDSERSLWD-WTAKQTYIALGNMMTAAAMIGVDSCPIEGF--DYEKVNNILSKEGLIDDKKEAISCMVSFGYRLREPKHSRARKERQEVITWVE |
| 3GFA Chain:A ((2-197)) | --------MISDSISKRRSIRKYKNQSISHETIEKIIEAGINAPSSKNRQPWRFVVITEKEK---ESMLKAMSKGIQNEINDNGLLPGSRQHIAGANYTVE-IMKQAPVTIFILNILG-----KSPLE------------------KL----------SPEERFYEMANMQSIGAAIQNMSLTAVELGLGSLWICDVYFAYRELCEWLNT----D---SQLVAAISLGYPDEEP-SRRPRLQLSDVTEWR- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79917 for 1233 contacts (-64.8/contact) +
2D Compatibility (PS) -17897 + (NN) -2177 + (LL) 3700
1D Compatibility (HY) -8400 + (ID) 2150
Total energy: -106841.0 ( -86.65 by residue)
QMean score : 0.488
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