Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVRLAFPNEIDQIMLLIEEARAEIAKTGSDQWQKEDGYPNRNDIIDDILNGYAWVGIEDGMLATYAAVIDGHEEVYDAIYEGKWLHDNHRYLTFHRIAISNQFRGRGLAQTFLQGLIEGHKGPD---FRCDTHEKNVTMQHILNKLGYQYCGKVPLDGVRLAYQKIKEKGETSIYREIDERNPM
2FIA Chain:A ((1-157))
MKIRVADEKELPMILQFLTEVKAYMDVVGITQWT--KDYPSQGDIQEDITKKRLYLLVHEEMIFSMATFCM---------------EQEQDFVWLKRFATSPNYIAKGYGSLLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGFTKIHESL------QMNRLDFGSFYLYVKELE-----
General information:
TITO was launched using:
RESULT:
Template:
2FIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88514 for 1115 contacts (-79.4/contact) +
2D Compatibility (PS) -16704 + (NN) -6645 + (LL) 1812
1D Compatibility (HY) -11600 + (ID) 1400
Total energy: -123051.0 ( -110.36 by residue)
QMean score : 0.402
(partial model without unconserved sides chains):
PDB file :
Tito_2FIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FIA-query.scw
PDB file :
Tito_Scwrl_2FIA.pdb
: