Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRCPKCGYNKSSVVDSRQAE-----EGTTIRRRRECEKCGNRFTTFERLEEL------PLLVIKKDGTREQFSRDKILNGII-QSAQKRPVSSEDIENCILRIERKIRSEYEDEVSSITIGNLVMDELAELDEITYVR-----------FASVYKSFKDVDE--IEELLQQITKRVRSKKSGSV--------------------------- |
| 4KYI Chain:A ((4-544)) | GSEISKTEAGQYSVSAPEHKGLVLSGGGAKGISYLGMIQALQERGKIKNLTHVSGASAGAMTASILAVGMDIKDIKKLIEGLDITKLLDNSGVGFRARGDRFRNILDVIYMMQMKKHLESVQQPIPPEQQMNYGILKQKIALYEDKLSRAGIVINNVDDIINLTKSVKDLEKLDKALNSIPTELKGAKGEQLENPRLTLGDLGRLRELLPEENKHLIKNLSVVVTNQTKHELERYSEDTTPQQSIAQVVQWSGAHPVLFVPGRNAKGEYIADGGILDNMPEIEGLDREEVLCVKAEAGTAFEDRVNKAKQSAMEAISWFKARMDSLVTSSVLNREKVYYNIDNMIYINTGEVTTTNTSPTPEQRARAVKNGYD-QTMQLLDSHKQTFDHPLMAILYIG------HDKLKDALIDEKSEKEIFEASAHAQAILHLQEQIVKEMNDGDYS-----SVQNYLDQIEDILTVDAKMDDIQKEKAFALCIKQVNFLSEGKLETYLNKVEAEAKAAAEPSWATKILNLLWAPIEWVVSLFKGPAQDFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2148 for 825 contacts (-2.6/contact) +
2D Compatibility (PS) -15640 + (NN) -4477 + (LL) 820
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -31195.0 ( -37.81 by residue)
QMean score : 0.450
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