Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKILNQPTDVVTEMLDGLAYVHNDLVHRVEGFDIIARNEEK-SGKVALISGGGSGHEPSHAGFVGEGMLSAAVCGAVFTSPTPDQVLEAIKEADEGAGVFMVIKNYSGDIMNFEMAQDMAEMEGIDVASVVVDDDIAVEDSLYTQGKRGVAGTILVHKILGHAARHGKSLQEIKAIADELVPNIHTVGLALSGATVPEVGKPGFVLAEDEIEFGIGIHGEPGYRKEKMQPSKALATELVDKLIE------------------------SFDAKSGEKYGVLINGMGATPLMEQYVFANDVAKLLEDKGIEVNYKKLGNYMTSIDMAGLSLTLIKLENQEWL--EALNSDVTTIAW
1OI2 Chain:A ((20-364))---------DVLDEQLAGLAKAHPS-LTLHQDPVYVTRADAPVAGKVALLSGGGSGHEPMHCGYIGQGMLSGACPGEIFTSPTPDKIFECAMQVDGGEGVLLIIKNYTGDILNFETATELLHDSGVKVTTVVIDDDVAVKDSLYTAGRRGVANTVLIEKLVGAAAERGDSLDACAELGRKLNNQGHSIGIALGAC-----------LADNEMEFGVGIHGEPGIDRRPFSSLDQTVDEMFDTLLVNGSYHRTLRFWDYQQGSWQEEQQTKQPLQSGDRVIALVNNLGATPLSELYGVYNRLTTRCQQAGLTIERNLIGAYCTSLDMTGFSITLLKVDD-ETLALWDAPVHTPALNW


General information:
TITO was launched using:
RESULT:

Template: 1OI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -153311 for 2811 contacts (-54.5/contact) +
2D Compatibility (PS) -33650 + (NN) -14628 + (LL) 1268
1D Compatibility (HY) -26000 + (ID) 6550
Total energy: -232871.0 ( -82.84 by residue)
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_1OI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OI2-query.scw
PDB file : Tito_Scwrl_1OI2.pdb: