Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTYKDYTGLDRTELLSKVRHMMSDKRFNHVLGVERAAIELAERY------GYD---KEKAGLAALLHDYAKELSDDEFLRLIDKYQLDPDLKKWGNNIWHGLVGIYKIQEDL---AIKD---QDILAAIAKHTVGS-----A--------QMSTLDKIVYVADYIEHNRDFPGVEEARELAKVDLNKAVAYETARTVSFLASKAQPIYPKTIETYNAYIPYLD |
| 3RF0 Chain:A ((17-140)) | ----------------------YNIDREQARRVLETTEQLYTQWLAQNTKLVQPQLEALLKWAAMLHEVGLSINHS----------------------GMHRHSAYILQN-TNLPGFNQEQQTLLATLVRMHRKAIKLDELPRLNLFKKKYYLPLIQLLRLSTLLNNQRQSTTTPESLRLITDDSHWTLRFPHGYLTQNSLVQLDFEREQAYWDDVVGWKLVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29820 for 673 contacts (-44.3/contact) +
2D Compatibility (PS) -10242 + (NN) -5352 + (LL) 3040
1D Compatibility (HY) -3600 + (ID) 550
Total energy: -46524.0 ( -69.13 by residue)
QMean score : 0.455
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