Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEILVLGAGYAGLKAVRNLQKQSGDFHITLVDMNDYHYEATELHEVAAGSQPKEKITFPIKDVINTNKVN-FMQDEVLKVDAENKTVTVKN-----NGELHYDYVVVALGFVSETFGIKGAM-ENALQMTNISQAENIHNHIVNTMKLYRETKDENLLKLLVCGAGFTGIELAGAMVDERPKYAALAGVKPEQIEIICVEAATRILPMF-DDELAQYGVNLIKDLGINLMLGSMIKEIKPGEV----VYGTSKEDEELKSITAGTIIWTTGVSGSPVMG-ESGFD-QRRGRVMVNSDLRDPKYDNVYVIGDVSAFMDTESG-RPFPTTAQIATRMGAHVAKNLLHQIKGEATEDFSYSPQGTVASVGNTHGLGVVGKTKIKKYPASVMKKIIMNKSLVDMGGLKELLAKGRFDLYH |
3IWA Chain:A ((4-329)) | -KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA----------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA----------GEVSKAVIVGGGFIGLEMAVSLADMW------------GIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLE-GENGKVARVITD--K---RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADGDATFPGAVGSWAVKLFEGSASGAGLTVEGALREGYDAVNVHVEQIMTLQLVVDRPTRRVLGIQGFSTLGD |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -202638 for 2215 contacts (-91.5/contact) +
2D Compatibility (PS) -29171 + (NN) -8379 + (LL) 4152
1D Compatibility (HY) -12400 + (ID) 3400
Total energy: -251836.0 ( -113.70 by residue)
QMean score : 0.561
|
|
|