Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKRIQKNILREFEMESSEQALAIWSVLSDVYDK---SPWSLSQISE-------------DLKKDSTDYFFVYNDGEVIGFLALQQLV--------GEVEITNIAVKKNYQGKGYAYQLMSMIAD------IEVPVFLEVRYSNIVAQKLYERCGFVVLGKRKNYYHDPIEGAIVMRKG
1TIQ Chain:A ((4-168))
----------KMKKCSREDLQTLQQLSIETFNDTFKEQNSPENMKAYLESAFNTEQLEKELSNMSSQFFFIYFDHEIAGYVKVNIDDAQSEEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALERNKK-NIWLGVWEKNENAIAFYKKMGFVQTGAHSFYMGDEEQTDLIMAKT
General information:
TITO was launched using:
RESULT:
Template:
1TIQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82780 for 882 contacts (-93.9/contact) +
2D Compatibility (PS) -14490 + (NN) -507 + (LL) 1352
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -104725.0 ( -118.74 by residue)
QMean score : 0.503
(partial model without unconserved sides chains):
PDB file :
Tito_1TIQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TIQ-query.scw
PDB file :
Tito_Scwrl_1TIQ.pdb
: