Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------MRVNITLEHKESGERLYLTSKNKRNTPDRLQLKKYSPKLRKHVVFTEVK----------------------------------------------------------------- |
2L8K Chain:A ((1-123)) | GLTATLAALTDDDFQFLSDVLDCRAVRSAMNLRAALTSFQVAQYRNILNASLQVDRDAARSRRLMAKLADFAVEQEVTAGDRVVVIDGLDRMAHFKDDLVLVPLTTKVVGGSRCTICDVVKEE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2L8K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 8782 for 219 contacts (40.1/contact) +
2D Compatibility (PS) -5279 + (NN) -4296 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 300
Total energy: -2293.0 ( -10.47 by residue)
QMean score : 0.263
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