Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLFITFEGPEGAGKTTVLQEIKNILTAEGLQVMATREPGGIDIAEQIREVILNENNILMDPKTEALLYAAARRQHLVEKVKPALEQGFIVLCDRFIDSSLAYQGYARGLGIDEVLSINEFAIGDMMPHVTVYFSIDPEEGLKRIYANGSREKNRLDLEKLDFHTKVQEGYQELMKRFPERFHSVDAGQSKDLVVQDVLKVIDEALKKIQL
3UWO Chain:B ((11-195))
--GLFVTLEGPEGAGKSTNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPV--------------LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDAG-----------------------
General information:
TITO was launched using:
RESULT:
Template:
3UWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -71010 for 1310 contacts (-54.2/contact) +
2D Compatibility (PS) -18955 + (NN) -8687 + (LL) 3408
1D Compatibility (HY) -9200 + (ID) 3700
Total energy: -108144.0 ( -82.55 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_3UWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UWO-query.scw
PDB file :
Tito_Scwrl_3UWO.pdb
: