Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MLVIAGLGNPGKNYENTRHNVGFMVIDQLAKEWNIELNQNK-FNGLYGTGFVSGKKVLLVKPLTYMNLSGECLRPLMDYYDVDNEDLTVIYDDLDLPTGKIRLRTKGSAGGHNGIKSLIQHLGTSEFDRIRIGIGRPVNGMKVVDYVLGSFTKEEAPEIEEAVDKSVKACEASLSKP-FLEVMNEFNAKV
4QT4 Chain:A ((1-189))
MVKMIVGLGNPGSKYEKTKHNIGFMAIDNIVKNLDVTFTDDKNFKAQIGSTFINHEKVYFVKPTTFMNNSGIAVKALLTYYNIDITDLIVIYDDLDMEVSKLRLRSKGSAGGHNGIKSIIAHIGTQEFNRIKVGIGRPLKGMTVINHVMGQFNTEDNIAISLTLDRVVNAVKFYLQENDFEKTMQKFNG--
General information:
TITO was launched using:
RESULT:
Template:
4QT4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111440 for 1520 contacts (-73.3/contact) +
2D Compatibility (PS) -19945 + (NN) -7335 + (LL) 256
1D Compatibility (HY) -20400 + (ID) 4500
Total energy: -163364.0 ( -107.48 by residue)
QMean score : 0.630
(partial model without unconserved sides chains):
PDB file :
Tito_4QT4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QT4-query.scw
PDB file :
Tito_Scwrl_4QT4.pdb
: