Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQDTFPLAIGVLKGALPFMADLIKHIDTYLEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
4QYI Chain:B ((6-173))
---IEIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIA---------
General information:
TITO was launched using:
RESULT:
Template:
4QYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -133699 for 1293 contacts (-103.4/contact) +
2D Compatibility (PS) -18012 + (NN) -6819 + (LL) 1276
1D Compatibility (HY) -20400 + (ID) 4150
Total energy: -181804.0 ( -140.61 by residue)
QMean score : 0.537
(partial model without unconserved sides chains):
PDB file :
Tito_4QYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QYI-query.scw
PDB file :
Tito_Scwrl_4QYI.pdb
: