Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEEEETDIK------------------------------------------------------------------NGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLLPGEAETILKRMGMDERKTDIDFELKETVKVIDGPFANFTGSIEEIDYDKSKVKVFVNMFGRETPVELEFTQIDKL |
| 1NPP Chain:A ((5-248)) | QVQELEKKWYALQVEPGKENEAKENLLKVLELEGLKDLVDEVIVPAEEKVVIRAQGKEKYRLSLKGNARDISVLGKKGVTTFRIENGEVKVVESVEGDTCVNAPPISKPGQKITCKENKTEAKIVLDNKIFPGYILIKAHMNDKLLMAIEKTPHVFRPVMV---GGKPVPLKEEEVQNILNQIKRGVKPSKVEFEKGDQVRVIEGPFMNFTGTVEEVHPEKRKLTVMISIFGRMTPVELDFDQVEKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NPP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62573 for 1154 contacts (-54.2/contact) +
2D Compatibility (PS) -18566 + (NN) -1963 + (LL) -56
1D Compatibility (HY) -14400 + (ID) 3500
Total energy: -101058.0 ( -87.57 by residue)
QMean score : 0.574
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