Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALNIEEIIASVKEATVLELNDLVKAIEEEFGVTAAAPVAVAGGAAAGGAAEEQSEFDLILAGA-GSQKIKVIKVVREITGLGLKEAKELVDNTP---KPLKEGIAKEEAEELKAKLE------EVGASVEVK
2W9R Chain:A ((22-103))
--------------------------------------------------LKPPSMYKVILVNDDYTPMEFVIDVLQKFFSYDVERATQLMLAVHYQGKAICGVFTAEVAETKVAMVNKYARENEHPLLCTL-
General information:
TITO was launched using:
RESULT:
Template:
2W9R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9168 for 465 contacts (-19.7/contact) +
2D Compatibility (PS) -7701 + (NN) -2464 + (LL) 4644
1D Compatibility (HY) -6000 + (ID) 700
Total energy: -21389.0 ( -46.00 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_2W9R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W9R-query.scw
PDB file :
Tito_Scwrl_2W9R.pdb
: